Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs73190931 chr13:47029067 T/C 5.83E-7 288 24.8 34.38 23.23 KM Plot
KIRP rs73212370 chr8:13831720 G/T 1.44E-15 286 26.2 19.4 8.37 KM Plot
KIRP rs73212374 chr8:13835814 G/C 1.67E-15 285 26.1 19.4 8.37 KM Plot
KIRP rs73212375 chr8:13836117 G/C 1.11E-16 283 26.1 19.4 8.37 KM Plot
KIRP rs73212758 chr4:5509612 A/C 4.23E-5 288 25.6 30.38 7.13 KM Plot
KIRP rs7323875 chr13:47590381 C/G 3.39E-8 289 26.2 20.27 10.83 KM Plot
KIRP rs73283687 chr17:10220670 G/C 2.12E-7 286 25.63 30.1 16.13 KM Plot
KIRP rs73283859 chr16:90062520 G/C 4.07E-8 281 26 25.57 9.77 KM Plot
KIRP rs73283869 chr16:90067184 G/A 3.75E-8 281 26.2 25.57 9.77 KM Plot
KIRP rs73325389 chr17:46104645 A/G 8.63E-10 284 25.7 25.13 9 KM Plot
KIRP rs73343365 chr14:43744867 G/T 2.92E-6 288 26.57 17.35 13.17 KM Plot
KIRP rs73419424 chr15:57635316 G/A 0 282 25.67 26.4 4.07 KM Plot
KIRP rs7354819 chr1:58987762 C/A 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs73554533 chr6:134949755 A/C 1.57E-11 286 26.28 25.23 9 KM Plot
KIRP rs73577863 chr16:51392440 C/T 6.32E-5 286 26.28 20.13 10.73 KM Plot